Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926003.1_cds_XP_016474118.1_66178
CDS Infomation

[gene=LOC107795928] [db_xref=GeneID:107795928] [protein=DNA-binding protein SMUBP-2-like] [protein_id=XP_016474118.1] [location=join(107276..108023,108599..108907,108999..109282,110576..111607,112918..113086,113495..113652,114454..114696)] [gbkey=CDS]
Sequence

ATGCAAGTGAAACTACTAAAGATGGAATCTTTATGCAATTCCTGTGGCAGCATCTCCACT
TTAGCTCCAAGCTGCCTCACTCTCCGCTTCTATAAAAAAAGATCCAATCTTTCTTCTTTC
TTTGGCTCTGTTACTCTTTCCAACCCCAAAAATCGCATCTTTCTTGATTCCTCCATATCT
TTCCCAAATTACAATATTCAAGCCAGCTCAAGTAGTGGCACTAAGTCCCTCAGTCCCAGG
AGAAGAAAACCCAAGAATGTTAAAACTAGTGATATTCCTTCAGTTACAACAAAAGGGTCA
TTGGGAAAAAAGACAGAGAAAAACCAAGAATGTTCACAAGAGGAGAGGGATAGTGGGCCG
GTTAACGTGCGAGCATTGAATGAAAATGGTGACCCAATGGGGCGTAAAGATTTGGGTAAG
TGTGTTGTGAGGTGGATATCACAAGGGATGAAAGCTATGGCTACAGATTTTGCTACAGCA
GAGATGCAGGGAGAGTTTACTGAGGTTAAACAGAGAATGGAACCAGGATTGACTTTTGTT
ATTCAAGCTCAGCCTTATCTTAATGCTATACCTATGCCTCTTGGTCTTGAAGCTATTTGT
TTGAAGGCCTGTACTCATTATCCTACCCTCTTCGACAACTTCCAGCGCGAGCTAAGGGAC
GTTCTTCAGAACCTTCAGCGTAAATCTTTGGTCCAAGATTGGCGCGATACTGAGTCGTGG
AAGCTTCTCAAGGATCTTGCCATTTCAGCTCAGCATAAAGCCATTGCAAGGAAGACTTCT
CAACCAAAATTTGTTCCTGGTGTAATGGGAATGGACCTCGAGAAAGCCAAAGCCATGCAG
AGTAGGATTGATGATTTCACCAATCGGATGTCAGATTTGCTTCGTATCGAAAGGGATTCT
GAGTTGGAGTTCACTCAGGAGGAGTTGAATGCTGTCCCTGCACCTGTCTTAAATTCCGAG
GAACAGAAACCATTTGAATTCTTGGTTAGCCATGCTCAGCCCGAGCAGGAACTGTGTGAT
ACTATCTGCAATCTGACTGCAGTTAGCACGTCTATAGGATTAGGTGGAATGCATTTAGTG
TTGTTCAAATTGGAGGGAAATCACAGATTGCCTCCAACTAACCTCTCACCTGGGGACATG
GTTTGTGTCAGAACATGTGATAGTAGAGGAGCTGGCGCAACTTCTTGCATGCAAGGATTT
GTGCATAATCTGGGGGAGGATGGACGTAGCATCAGTTTGGCTCTTGAGTCGCTTCATGGA
GATTCTACCTTTTCCAAGCTCTTTGGGAAAAATGTGCGCATTGATCGCATTCAAGGATTG
GCTGATGCACTCACATATGAGCGCAATTGTGAAGCCTTAATGATGCTTCAGAAGAAAGGG
TTCCAGAAGAAAAATCCTTCAGTAGCTGTGGTAGCTACACTTTTTGGAGATAAAGAAGAC
CTAGCGTGGCTCGAGGAGAATGGCATGGCAGACTGGTCTGAAGTAGAACTTCCGGATTCC
ACAGACAGAAAATCATTTGACACTTCCCAGAGAAAAGCAATTGCATTAGGTTTAAACAAG
AATCGACCTATTATGATAATTCAAGGGCCTCCTGGCACAGGGAAGACCGGTATGCTGAAG
GAATTGATTTCTCTAGCTGTTAAACAAGGTGAAAGGGTGCTTGTAACTGCACCTACGAAT
GCAGCTGTCGACAACATGGTTGAAAAGTTGTCTGATATCGGACTCAACATTGTTCGTGTT
GGAAATCCTGCACGTATATCCCCTGCTGTAGCTTCAAAATCTTTGACTGAAATTGTGAAT
ACCGAGCTGGCTGATTTCCGAGCAGAGATTGAGAGGAAGAAGTCAGATCTTAGAAGAGAC
CTGAGATATTGTCTTAAGGATGATTCTTTGGCTGCTGGTATACGTCAACTTCTGAAACAG
CTTGGAAAGTCCATCAAGAGGGAAGAGAAGGAAACTGTGAAAGAAATCTTATCAAGTGCT
CAGGTTGTGCTTGCAACAAACATTGGGGCAGCTGATCCACTAATTAGGCGGCTGGACACG
TTTGATTTGGTTATTATAGATGAAGCTGGCCAAGCAATTGAACCATCATGTTGGATACCG
ATATTGCTCGGAAAGCGTTGTATTCTCGCAGGAGATCAATTCCAACTTGCTCCTGTGATC
CTTTCTAGAAAAGCGTTAGAAGGTGGTCTTGGAGTTTCCCTACTGGAGAGGGCAGCAAGT
TTGCATGACGGGATGCTGTCTACAAAGTTAACAACACAGTACAGAATGAACAATGCCATA
GCTAGCTGGGCTTCAAAGGAGATGTATGATGGATCCTTAATATCATCTCCAACCGTTGCT
TCTCATCTTCTGGTGGATTCTCCTTTTGTCAAGCCCACATGGGTTACACAGTGTCCGCTG
CTACTGCTTGATACGAGAATGCCTTATGGAAGCTTGTCAGTTGGTTGTGAAGAGCATCTG
GACCCTGCTGGCACTGGCTCCTTTTTCAATGAAGGCGAAGCAGATATCGTTGTTCAACAC
GTCTTCAGTTTAATTTATTCTGGTGTTCCCCCTGCAGCAATTGCAGTGCAGTCTCCTTAT
GTCGCTCAAGTGCAACTTCTTAGAGACAAAGTCGATGAGCTTCCAATGGCCACTGGCGTT
GAGGTTGCAACCATTGATAGCTTTCAAGGCCGTGAAGCAGATGCTGTGATTATATCCATG
GTTCGTTCAAACAATCTAGGAGCTGTTGGCTTTTTGGGAGACAGCAGGCGAATGAATGTT
GCCATAACAAGGGCAAGAAAGCATGTAGCAGTTGTCTGTGACAGTTCAACTATATGTCAC
AACACATATTTGGCGAGGCTGCTTCGTCATATTAGATACTTTGGCAAAGTAAAACATGTC
GAACCTGGTAGCTTTTGGGAATTTGGCCTTGGTATGGATCCAATGTTGCCTACTGCCAGT
TAA

Peptide Sequence

PEP ID

XP_016474118.1
PEP Infomation

PREDICTED: DNA-binding protein SMUBP-2-like [Nicotiana tabacum]
Sequence

MQVKLLKMESLCNSCGSISTLAPSCLTLRFYKKRSNLSSFFGSVTLSNPKNRIFLDSSIS
FPNYNIQASSSSGTKSLSPRRRKPKNVKTSDIPSVTTKGSLGKKTEKNQECSQEERDSGP
VNVRALNENGDPMGRKDLGKCVVRWISQGMKAMATDFATAEMQGEFTEVKQRMEPGLTFV
IQAQPYLNAIPMPLGLEAICLKACTHYPTLFDNFQRELRDVLQNLQRKSLVQDWRDTESW
KLLKDLAISAQHKAIARKTSQPKFVPGVMGMDLEKAKAMQSRIDDFTNRMSDLLRIERDS
ELEFTQEELNAVPAPVLNSEEQKPFEFLVSHAQPEQELCDTICNLTAVSTSIGLGGMHLV
LFKLEGNHRLPPTNLSPGDMVCVRTCDSRGAGATSCMQGFVHNLGEDGRSISLALESLHG
DSTFSKLFGKNVRIDRIQGLADALTYERNCEALMMLQKKGFQKKNPSVAVVATLFGDKED
LAWLEENGMADWSEVELPDSTDRKSFDTSQRKAIALGLNKNRPIMIIQGPPGTGKTGMLK
ELISLAVKQGERVLVTAPTNAAVDNMVEKLSDIGLNIVRVGNPARISPAVASKSLTEIVN
TELADFRAEIERKKSDLRRDLRYCLKDDSLAAGIRQLLKQLGKSIKREEKETVKEILSSA
QVVLATNIGAADPLIRRLDTFDLVIIDEAGQAIEPSCWIPILLGKRCILAGDQFQLAPVI
LSRKALEGGLGVSLLERAASLHDGMLSTKLTTQYRMNNAIASWASKEMYDGSLISSPTVA
SHLLVDSPFVKPTWVTQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGSFFNEGEADIVVQH
VFSLIYSGVPPAAIAVQSPYVAQVQLLRDKVDELPMATGVEVATIDSFQGREADAVIISM
VRSNNLGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICHNTYLARLLRHIRYFGKVKHV
EPGSFWEFGLGMDPMLPTAS

Transcript Sequence

Gene sequence data has not been registered.